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Computational modeling of mRNA degradation in Mycolicibacterium smegmatis
Palavra-chave:
RNase E cleavage
,
mRNA degradation
,
Transcript features
,
RNAseq
,
Mycolicibacterium smegmatis
, and
Machine learning
O Criador:
Sun, Huaming
Advisor:
Korkin, Dmitry
and
Shell, Scarlet
Editor:
Worcester Polytechnic Institute
Data Criada:
2024-05-04
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Bioinformatics & Computational Biology
Evolution of antibiotic resistance in mycobacteria
O Criador:
Lemay, Elizabeth
Advisor:
Shell, Scarlet
Editor:
Worcester Polytechnic Institute
Data Criada:
2023-08-11
Resource Type:
Major Qualifying Project
The influence of codon content on gene expression in mycobacteria
Palavra-chave:
Translation efficiency
,
Mycobacteria
,
Transcript stability
,
Tuberculosis
,
Mycolicibacterium smegmatis
, and
Gene expression
O Criador:
Atkins, Olivia
Advisor:
Shell, Scarlet
Editor:
Worcester Polytechnic Institute
Data Criada:
2023-04-26
Resource Type:
Major Qualifying Project
The Effects of mRNA Abundance on Degradation Rate
Palavra-chave:
biovisualization
,
metabolic pathways
,
mRNA abundance
,
gene expression
,
mRNA half-life
, and
Mycolicibacterium smegmatis
O Criador:
Le, Van
and
Orszulak, Adrian
Advisor:
Shell, Scarlet
and
Harrison, Lane T.
Editor:
Worcester Polytechnic Institute
Data Criada:
2022-04-28
Resource Type:
Major Qualifying Project
The Impact of Ribosome Binding Site Sequences on Translation in Mycobacteria
Palavra-chave:
Ribosome Binding Site
,
M. smegmatis
,
Translation
,
Shine-Dalgarno
, and
Mycobacteria
O Criador:
Masiello, Catherine
Advisor:
Shell, Scarlet
Editor:
Worcester Polytechnic Institute
Data Criada:
2022-04-29
Resource Type:
Major Qualifying Project
Cu+-importing Phenotypes of ΔCuiT strain and the Expression Optimization of P1B-ATPases in Pseudomonas aeruginosa
Palavra-chave:
Phenotype
,
CuiT
,
Expression optimization
,
Copper importer
,
ATPases
, and
Pseudomonas aeruginosa
O Criador:
Xu, Cheng
Advisor:
Argüello, José M.
,
Kaminski, George A.
,
Shell, Scarlet
, and
Dempski, Robert E.
Editor:
Worcester Polytechnic Institute
Data Criada:
2021-10-01
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Chemistry & Biochemistry
The role of RNase E in Mycolicibacterium smegmatis
Palavra-chave:
mRNA cleavage
,
RNA degradosome
,
mRNA degradation
,
Mycolicibacterium smegmatis
,
Transcriptome
, and
RNase E
O Criador:
Zhou, Ying
Advisor:
Shell, Scarlet
Editor:
Worcester Polytechnic Institute
Data Criada:
2022-01-25
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Biology & Biotechnology
Investigating the relationship between mRNA degradation rates and secondary structure in mycobacteria
O Criador:
Kelly, Jessica M.
Advisor:
Shell, Scarlet
Editor:
Worcester Polytechnic Institute
Data Criada:
2021-05-03
Resource Type:
Major Qualifying Project
Award:
Provost's MQP Award
RNase III in M. smegmatis
Palavra-chave:
RNase III
,
rRNA
,
mRNA
, and
Mycobacterium smegmatis
O Criador:
Joubran, Samantha R.
Advisor:
Shell, Scarlet
and
Argüello, José M.
Editor:
Worcester Polytechnic Institute
Data Criada:
2021-05-06
Resource Type:
Major Qualifying Project
Mechanisms of Differential Expression of ESX-1 Secretion System Genes in Mycobacterium smegmatis
Palavra-chave:
quantitative PCR
,
Transcription start site
,
Cleavage site
,
Tuberculosis
,
ESX-1
, and
5' RACE
O Criador:
Peters, Ryan G.
Advisor:
Shell, Scarlet
Editor:
Worcester Polytechnic Institute
Data Criada:
2021-05-06
Resource Type:
Major Qualifying Project
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Major Qualifying Projects
22
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O Criador
Alfaro, Carlie Logan
1
Atkins, Olivia
1
Barter, Megan Victoria
1
Dainis, Joseph P.
1
Davis, Alexa B.
1
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O Criadors
»
Advisor
Argüello, José M.
6
Buckholt, Michael Allan
4
Dempski, Robert E.
1
Harrison, Lane T.
1
Kaminski, George A.
1
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Advisors
»
Contributor
Adams, David S.
1
Argüello, José M.
2
Dempski, Robert E.
1
Duffy, Joseph B.
1
Flaherty, Patrick
1
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Major
Biochemistry
3
Biology & Biotechnology
17
Interdisciplinary
3
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Bioinformatics & Computational Biology
1
Biology & Biotechnology
3
Chemistry & Biochemistry
1
Editor
Worcester Polytechnic Institute
27
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Health
1
Innovation
1
UN SDG
3 - Good Health and Well-being
2
Tipo de recurso
Major Qualifying Project
22
Dissertation
3
Thesis
2
License
https://creativecommons.org/licenses/by/4.0/
2
Award
Provost's MQP Award
2
