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Korkin, Dmitry
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Analysis of the Relationship Between Co-localization of Proteins in Protein Assemblies and Protein Proximity in 3-D Space
Creator:
Xie, Longsheng
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-18
Resource Type:
Thesis
Degree:
MS
Unit:
Bioinformatics & Computational Biology
Prioritizing Clinical Genomes
Keyword:
genomics
,
algorithm
,
comparative analysis
, and
variant
Creator:
Regan, Ilona M.
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-10-16
Resource Type:
Major Qualifying Project
In Silico Edgetic Profiling and Network Analysis of Human Genetic Variants, with an Application to Disease Module Detection
Keyword:
Next Generation Sequencing
Creator:
Cui, Hongzhu
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-18
Resource Type:
Dissertation
Degree:
PhD
Unit:
Bioinformatics & Computational Biology
PubMed AuthorMap: A Study of Research Collaboration in the Life Science Fields
Creator:
Northcott, Haylea Tricia
and
Moulaison, Amanda Wylie
Advisor:
Ryder, Elizabeth F.
and
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-23
Resource Type:
Major Qualifying Project
Sound Signal Coalescence
Creator:
Xiao, Jeffrey Yangfeng
,
Lee, Ryan Tarango
, and
Morris, Tyler Drew
Advisor:
Bitar, Stephen John
and
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-07-25
Resource Type:
Major Qualifying Project
Tracking DNA Damage Repair in Cancerous Cells
Creator:
Nicolella, Alyssa Alexandra
and
Corace, Michael L.
Advisor:
Korkin, Dmitry
and
Manning, Amity L.
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-18
Resource Type:
Major Qualifying Project
The Creation and Utilization of Bioinformatics Tools to Study Patterns of the Presented HIV Immunopeptidome
Creator:
Le, Ann-Elizabeth V.
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-17
Resource Type:
Major Qualifying Project
Predicting DNA Damage in Fluorescent Imaging
Creator:
Vadivazhagu, Surya
and
McDonough, Daniel
Advisor:
Korkin, Dmitry
and
Manning, Amity L.
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-06
Resource Type:
Major Qualifying Project
Studying inter- and intra-tumor heterogeneity of triple-negative breast cancer
Keyword:
cancer
,
clustering
,
TNBC
, and
unsupervised learning
Creator:
Leshchyk, Anastasia
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-28
Resource Type:
Thesis
Degree:
MS
Unit:
Bioinformatics and Computational Biology
A mixed reality framework for surgical navigation: approach and preliminary results
Keyword:
Minimally Invasive Surgery
,
Mixed Reality
, and
Image Guidance
Creator:
Murlidaran, Shravan
Advisor:
Fichera, Loris
and
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-25
Resource Type:
Thesis
Degree:
MS
Unit:
Robotics Engineering
Propensity of Endogenous Alternative Splicing to Mediate Mutative Damage
Keyword:
Alternative Splicing
,
mRNAseq
,
Mutation
,
Cancer
,
Statistics
, and
Machine Learning
Creator:
Lutz, Ashley
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-25
Resource Type:
Thesis
Degree:
MS
Unit:
Bioinformatics and Computational Biology
Boosting Gene Expression Clustering with System-Wide Biological Information and Deep Learning
Keyword:
gene expression clustering
,
community detection
,
biological network
,
deep learning
, and
robust autoencoder
Creator:
Cui, Hongzhu
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-24
Resource Type:
Thesis
Degree:
MS
Unit:
Computer Science
Leveraging Omics Data to Expand the Value and Understanding of Alternative Splicing
Keyword:
Alternative Splicing
and
Omics
Creator:
Johnson, Nathan T.
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-08
Resource Type:
Dissertation
Degree:
PhD
Unit:
Bioinformatics and Computational Biology
Augmented DIAMOnD: A Method for Improving Disease Networks Among Human Genes
Creator:
Specht, Kevin Brian
Advisor:
Wu, Zheyang
and
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2017-04-27
Resource Type:
Major Qualifying Project
Disease Containment Protocols for Confined Environments
Creator:
Zapatka, Zachary J
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2016-02-02
Resource Type:
Major Qualifying Project
HoloNet: Holographic Networks
Creator:
Van Rensselaer, William Alexander
,
Sawin, Jonathan Robert
, and
Margvelashvili, Vakhtang
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2017-05-04
Resource Type:
Major Qualifying Project
MOLECULAR EVOLUTION OF EBOLA: A BIOINFORMATICS APPROACH
Creator:
Zhao, Yifan
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2015-09-11
Resource Type:
Major Qualifying Project
New Drugs for An Old Disease: Discovery and Understanding of Antibiotics and Oxidative Stress Effects on the M. smegmatis Transcriptome
Creator:
Maffucci, Casey
,
Murphy, Rachel Lee
, and
Tegan, Caeli
Advisor:
Buckholt, Michael Allan
,
Shell, Scarlet
, and
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2018-04-26
Resource Type:
Major Qualifying Project
New Drugs for an Old Disease: Discovery and Understanding of Antibiotics and Oxidative Stress on the M. smegmatis Transcriptome
Creator:
Tegan, Caeli C
,
Maffucci, Casey Catherine
, and
Murphy, Rachel
Advisor:
Buckholt, Michael Allan
,
Shell, Scarlet
, and
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2018-04-26
Resource Type:
Major Qualifying Project
Gene fusions in cancer: Classification of fusion events and regulation patterns of fusion pathway neighbors
Keyword:
semi-supervised machine learning
,
chromosomal abnormalities
,
gene fusion
,
Cancer
, and
Machine Learning
Creator:
Hughes, Katelyn
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2016-05-05
Resource Type:
Thesis
Degree:
MS
Unit:
Bioinformatics and Computational Biology
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