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Korkin, Dmitry
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Gene fusions in cancer: Classification of fusion events and regulation patterns of fusion pathway neighbors
Keyword:
Cancer
,
semi-supervised machine learning
,
gene fusion
,
Machine Learning
, and
chromosomal abnormalities
Creator:
Hughes, Katelyn
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2016-05-05
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
Leveraging Omics Data to Expand the Value and Understanding of Alternative Splicing
Keyword:
Omics
and
Alternative Splicing
Creator:
Johnson, Nathan T.
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-08
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Bioinformatics & Computational Biology
Boosting Gene Expression Clustering with System-Wide Biological Information and Deep Learning
Keyword:
community detection
,
biological network
,
robust autoencoder
,
deep learning
, and
gene expression clustering
Creator:
Cui, Hongzhu
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-24
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Computer Science
Propensity of Endogenous Alternative Splicing to Mediate Mutative Damage
Keyword:
Mutation
,
Alternative Splicing
,
Cancer
,
mRNAseq
,
Statistics
, and
Machine Learning
Creator:
Lutz, Ashley
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-25
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
A mixed reality framework for surgical navigation: approach and preliminary results
Keyword:
Mixed Reality
,
Minimally Invasive Surgery
, and
Image Guidance
Creator:
Murlidaran, Shravan
Advisor:
Fichera, Loris
and
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-25
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Robotics Engineering
Studying inter- and intra-tumor heterogeneity of triple-negative breast cancer
Keyword:
unsupervised learning
,
clustering
,
TNBC
, and
cancer
Creator:
Leshchyk, Anastasia
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2019-04-28
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
In Silico Edgetic Profiling and Network Analysis of Human Genetic Variants, with an Application to Disease Module Detection
Keyword:
Next Generation Sequencing
Creator:
Cui, Hongzhu
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-18
Resource Type:
Dissertation
Degree:
PhD
Unit (Department):
Bioinformatics & Computational Biology
Analysis of the Relationship Between Co-localization of Proteins in Protein Assemblies and Protein Proximity in 3-D Space
Creator:
Xie, Longsheng
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2020-05-18
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
ELUCIDATION OF PERSISTENT MUTATIONAL LANDSCAPE IN SARS-CoV-2 MAIN PROTEASE: A STRUCTURAL BIOINFORMATICS ANALYSIS
Keyword:
SARS-CoV-2, Main Protease, spatial-temporal, mutation, persistent, selection, molecular dynamics
Creator:
Mkandawire, Winnie
Advisor:
Korkin, Dmitry
and
Schiffer, Celia
Publisher:
Worcester Polytechnic Institute
Date Created:
2021-05-06
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
A landscape of population-specific variation effects on ligand binding site in the healthy population
Creator:
Sun, Mo
Advisor:
Korkin, Dmitry
Publisher:
Worcester Polytechnic Institute
Date Created:
2021-04-28
Resource Type:
Thesis
Degree:
MS
Unit (Department):
Bioinformatics & Computational Biology
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Unit (Department)
Bioinformatics & Computational Biology
9
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Robotics Engineering
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Worcester Polytechnic Institute
13
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