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Filtering by: Unit (Department) Bioinformatics & Computational Biology Remove constraint Unit (Department): Bioinformatics & Computational Biology Collections Masters Theses Remove constraint Collections: Masters Theses

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Deciphering the Role of Alternative Splicing in Molecular Assemblies: Are Immortalized Cell Lines Good Data Sources?

Keyword:

structure, conservation, alternative splicing, and molecular assembly

Creator:

Bao, Yue

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2024-05-04

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Lab vs Soil: The Transcriptome of Pseudomonas putida

Keyword:

Pseudomonas putida, Soil, Synthetic Biology, and Transcriptomics

Creator:

Voltmer, Stokley

Advisor:

Farny, Natalie

Publisher:

Worcester Polytechnic Institute

Date Created:

2023-12-15

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Sleep Duration and Quality Assessment using Smartphones

Creator:

Peng, Yuxiao

Advisor:

Agu, Emmanuel O.

Publisher:

Worcester Polytechnic Institute

Date Created:

2020-05-18

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Patterns of Viral Signal Peptide Sequences and their Corresponding Hosts

Keyword:

Virus, Viral-host evolution, Phylogeny, and Signal peptides

Creator:

Le, Ann-Elizabeth V.

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2020-09-20

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
A landscape of population-specific variation effects on ligand binding site in the healthy population

Creator:

Sun, Mo

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2021-04-28

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
ELUCIDATION OF PERSISTENT MUTATIONAL LANDSCAPE IN SARS-CoV-2 MAIN PROTEASE: A STRUCTURAL BIOINFORMATICS ANALYSIS

Keyword:

SARS-CoV-2, Main Protease, spatial-temporal, mutation, persistent, selection, molecular dynamics

Creator:

Mkandawire, Winnie

Advisor:

Korkin, Dmitry and Schiffer, Celia

Publisher:

Worcester Polytechnic Institute

Date Created:

2021-05-06

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Analysis of the Relationship Between Co-localization of Proteins in Protein Assemblies and Protein Proximity in 3-D Space

Creator:

Xie, Longsheng

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2020-05-18

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Genome Studies of Gene Expression and Alternative Splicing During iPSC Skeletal Muscle Induction and Differentiation

Keyword:

Iso-Seq, novel genes and transcripts, FSHD, differential expression, functional analysis, and iPSC

Creator:

Wu, Yibo

Advisor:

Wu, Zheyang

Publisher:

Worcester Polytechnic Institute

Date Created:

2019-05-31

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Simulations of Different P-values Combination Methods Using SNPs on Diverse Biology Levels

Keyword:

statistical power, haplotype block, p-value combination methods, Omni-TFisher, and GEFOS

Creator:

Zhang, Ruosi

Advisor:

Wu, Zheyang

Publisher:

Worcester Polytechnic Institute

Date Created:

2019-05-30

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology
Studying inter- and intra-tumor heterogeneity of triple-negative breast cancer

Keyword:

unsupervised learning, clustering, TNBC, and cancer

Creator:

Leshchyk, Anastasia

Advisor:

Korkin, Dmitry

Publisher:

Worcester Polytechnic Institute

Date Created:

2019-04-28

Resource Type:

Thesis

Degree:

MS

Unit (Department):

Bioinformatics & Computational Biology

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Masters Theses[remove]13

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Creator

Bao, Yue1
Hughes, Katelyn1
Le, Ann-Elizabeth V.1
Leshchyk, Anastasia1
Lutz, Ashley1
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Advisor

Agu, Emmanuel O.1
Farny, Natalie1
Korkin, Dmitry8
Ryder, Elizabeth F.1
Schiffer, Celia1
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Contributor

Agu, Emmanuel O.1
Farny, Natalie1
Kondashov, Fyodor1
Korkin, Dmitry10
Manning, Amity L.2
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Unit (Department)

Bioinformatics & Computational Biology[remove]13

Publisher

Worcester Polytechnic Institute13

Resource type

Thesis13

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